LK acknowledges the support of an Australian Government Research Training Program Scholarship.

The protocols described here are in alignment with the Declaration of Helsinki and were approved by the Ethics Committees of the German Sports University Cologne (9/16/2013) and Griffith University (2019/808). Volunteers were screened to ensure the absence of relevant pathologies and provided written informed consent.
1. Staining of RBC proteins using immunohistochemistry protocols
NOTE: A detailed list of the required chemicals and materials is provided in the Table of Materials. The following sections describe the preparation of the required solutions, followed by a detailed description of the immunohistochemistry protocol (Figure 1).
<img alt="Figure 1" class="xfigimg" src="/files/ftp_upload/64843/64843fig01.jpg" /> 
Figure 1: Schematic of the individual steps required for the immunohistochemical and immunofluorescence staining of RBC-NOS at phosphorylation site 1177. A typical workflow of the presented protocols stretching from solution preparation and blood sampling to antibody-based detection and visualization is presented. <a href="https://jove.unicartagenaproxy.elogim.com/files/ftp_upload/64843/64843fig01large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
<ol>
	<li>Collection of blood sample
	<ol>
		<li>Obtain blood samples (10 mL of whole blood) from seven healthy males. The volunteers were healthy individuals reportedly free from cardiovascular, hematological, neurological, endocrine, or metabolic diseases. The volunteers were also non-smokers.</li>
		<li>Collect blood using a sterile needle and syringe from a prominent vein in the antecubital region of the forearm, and immediately transfer into tubes coated with one of the following anticoagulants: sodium heparin (for immunohistochemistry) or ethylenediaminetetraacetic acid (EDTA; for fluorescent labeling).</li>
		<li>Expose the anticoagulated blood samples to precisely-controlled mechanical forces using a Couette-type shearing system, as described before7,20.
		<ol>
			<li>The shearing apparatus comprises a rotatable cup and a stationary bob, separated by a 300 &#181;m gap. Transfer the blood sample into the gap, which causes the precisely controllable rotational velocity of the cup to exert well-controlled mechanical forces onto the sample. Representative data presented here were produced by applying mechanical forces reflective of those occurring within the human vasculature (5 Pa) for extended durations (300 s).</li>
		</ol>
		</li>
	</ol>
	</li>
	<li>Preparation of solutions necessary for immunostaining
	<ol>
		<li>Prepare the solutions as in Table 1. The solutions can be prepared prior to performing the immunostaining procedure and stored at given temperature until needed. 
		NOTE: Storage duration may vary between the chemicals. Check the material safety data sheet.</li>
	</ol>
	</li>
	<li>Sample preparation
	<ol>
		<li>Process whole blood immediately after withdrawal or experimental treatment (where applicable; e.g., mechanical stimulus in our samples; see step 1.1.3) to be able to detect short-living effects, for example after shear stress application, exercise, short-duration hypoxia exposure, etc.</li>
		<li>Perform RBC protein fixation using formaldehyde as follows: dilute whole blood at a ratio of 1:2 in 4% paraformaldehyde solution for 20 min at room temperature (RT). Centrifuge the sample at 132 x g for 3 min at RT and carefully remove the supernatant by pipetting.</li>
		<li>Re-suspend the RBC pellet in two volumes of 0.1 mol/L phosphate buffered saline (PBS) (1:3 dilution) and incubate for 5 min at RT. Repeat the centrifugation as described above and remove the supernatant, which should be clear, by pipetting. Re-suspend the RBC pellet in one volume of 0.1 mol/L PBS (1:2 dilution).</li>
		<li>Prepare blood smears as follows: label a microscope slide with the sample ID, antibody applied, etc. using an alcohol resistant pen (e.g., pencil). Then, add 10 &#181;L of the prepared RBC solution right above the label field.</li>
		<li>Place a second slide on the sample at an angle of approximately 45&#176; and disperse the sample evenly along the slide. Heat-fix the slide over a Bunsen burner by hovering the sample over the burner with constant movement for 5-7 s. 
		NOTE: It is recommended to air-dry the samples prior to heat fixing. The samples can be stored at RT until staining (Figure 2).</li>
	</ol>
	</li>
	<li>Immunohistochemistry staining
	<ol>
		<li>Mark two areas on each slide: a test area in which the RBCs are incubated with the respective primary and secondary antibody, and a control area in which the primary antibody is replaced by a control solution. This area serves as a within assay control to determine the background signal of the RBCs.</li>
		<li>Prepare solutions prior to or during the procedure, as per Table 2. A volume of 300 &#181;L is needed per test area and 200 &#181;L per control area. 
		&#8203;NOTE: It is important to note that these antibody-based staining procedures yield semi-quantitative, rather than quantitative, data. Thus, to ensure that meaningful conclusions may be drawn from the produced data, appropriate control samples (i.e., to provide a reference point for the assessed relative changes in protein activation) are absolutely required.</li>
		<li>For trypsin digestion, thaw 0.1% trypsin and equilibrate to RT. Mark two areas on each slide using a grease pencil: a test area (2/3 of the slide) and a control area (1/3 of the slide). Carefully apply tris-buffered saline (TBS) using transfer pipettes to wash the sample areas. Let the TBS sit for 30 s and then pour it off. Repeat the washing step. 
		NOTE: Add the following solutions to both the control and the test area, unless otherwise described. The areas need to be sufficiently covered with the respective solution. Apply the solutions using disposable transfer pipettes, and switch pipettes after each solution.</li>
		<li>Add 0.1% trypsin, cover the slides using a purpose-built incubation chamber with either a lid or aluminum foil, and incubate for 30 min at 37 &#176;C in an incubator. Following incubation, stop the enzyme reaction by adding tap water. Pour off the solution. Wash both areas 3x&#160;with TBS, as described above.</li>
		<li>For blocking peroxidase activation, add methanol solution and incubate for 30 min at RT. Cover the slides during that time. Pour off the solution. 
		NOTE: For immunofluorescence detection (section 2), this step may be omitted, given that the blocking of endogenous peroxidases serves to prevent artifactual signal caused by the detection with horseradish peroxidase (HRP) and 3,3&#8242;-Diaminobenzidine hydrate (DAB).</li>
		<li>Wash both areas 3x with TBS, as described in step 1.4.3. Add 3% skim milk solution and incubate for 30 min at RT to block. Pour off the solution. Do not wash afterwards.</li>
		<li>Add primary antibody (AB) only to the test area. Add AB control solution (see Table 2) to the control area. Incubate samples at 4 &#176;C overnight. Cover slides during that time to prevent drying. 
		NOTE: Avoid transferring the solutions from the test to the control area, as this will influence the control values.</li>
		<li>Pour off the antibody solution. Wash both areas 3x&#160;with TBS, as described in step 1.4.3.</li>
		<li>Perform a blocking step to prevent unspecific binding. Add 3% normal goat serum&#160;and incubate for 30 min at RT. Pour off the solution.</li>
		<li>Add the secondary antibody solution and incubate for 30 min at RT. Pour off the antibody solution. Wash the areas 3x&#160;with TBS, as described in step 1.4.3.</li>
	</ol>
	</li>
	<li>Development of staining and cover
	<ol>
		<li>Carry out the avidin-coupled HRP reaction (see dilution in Table 2) by adding diluted avidin-peroxidase solution and incubating for 30 min at RT. Pour off the solution.</li>
		<li>Prepare the DAB mixture to develop the immunostaining prior to use, as per Table 3. 
		CAUTION: DAB is dangerous. Consider hazard statements H341 (suspected of causing genetic defects) and H350 (may cause cancer). Consider the following precautionary statements: P201, P202, P280, P308+P313, P405, and P501.</li>
		<li>Perform DAB control staining as follows: collect the HRP solution from step 1.5.1 from a slide and mix with a small volume (e.g., 1 mL) of prepared DAB solution in a separate centrifuge tube before staining. The mixture should develop a brown/gray color.</li>
		<li>Place the slides under a microscope (magnification of at least 200x) and add DAB solution to both areas. Monitor the staining of the RBCs continuously and stop the staining by removing the DAB solution with a disposable pipette before the background starts to color. For RBC-NOS serine 1177 staining, the DAB incubation time is about 17 min.</li>
		<li>Perform sample dehydration. Place the slides in a glass rack and immerse for 5 s each in ethanol solutions of various dilutions, starting with 70%, followed by 96%, and then 100%, and finally in xylol. Remove the slides from the rack and place on a tissue, with RBCs at the top to absorb excess liquid.</li>
		<li>Add two or three drops of mounting medium throughout the slide. Cover the slide using a coverslip. Avoid the inclusion of air bubbles, as this hinders the microscopic evaluation. Dry the samples at least overnight in a fume hood.</li>
	</ol>
	</li>
	<li>Performing microscopic evaluation
	<ol>
		<li>For visualization and imaging, place slides in a transmitted-light microscope with a magnification of at least 200x. Ensure that the microscope is coupled to a camera to take pictures of the stained RBCs.</li>
		<li>Turn on the microscope light source. Turn on the microscope-attached camera and start the microscope control software. Use brightfield microscopy to determine the appropriate focus by turning the coarse and fine focus adjustment knobs and finding the level of focus where RBCs are visible.</li>
		<li>Set the background values of the pictures to 220 &#177; 5 gray values, measured on three cell-free areas of the slide. To do so, open the first picture using the freely available software ImageJ. Select the option Mean gray values using the panel Set measurements. Use the oval icon to measure the gray value using the Measure command. If the measured values are out of range, adjust the background light at the microscope accordingly. Repeat these steps until the background values are correct. 
		NOTE: These background values should be within the given range for all images taken. Otherwise, the data are not comparable.</li>
		<li>For analysis of RBC gray value, mark the edge of each RBC using the Oval selection tool within the ImageJ software. Determine the gray values of individual RBCs using the Measure command. Measure the gray values of a minimum of 50 RBCs from the test and a minimum of 10 RBCs from the control area. 
		NOTE: The total number of analyzed RBCs can be adjusted individually. The more RBCs analyzed, the more meaningful the result. However, the total number of analyzed RBCs should be comparable for each condition, subject, etc. within a given experiment.
		<ol>
			<li>Avoid analysis of RBCs near the grease pencil, as staining might be incomplete in this area. Avoid analysis of overlapping RBCs, as this affects the staining intensity. Only use RBCs that are separated from other RBCs. Analyze at least five images from the test and at least two images from the control area for the evaluation of 50/10 RBCs. Include RBCs from every picture in the final analysis.</li>
		</ol>
		</li>
		<li>To calculate staining intensity, compute the final signals as: 
		(individual test area RBC - mean test area background) - (individual control area RBC - mean control area background)</li>
	</ol>
	</li>
</ol>
<img alt="Figure 2" class="xfigimg" src="/files/ftp_upload/64843/64843fig02.jpg" /> 
Figure 2: Depiction of the fixative process and blood smear generation. (Scheme created with BioRender.com.) Diluted blood samples are chemically fixed in paraformaldehyde, then centrifuged and washed with phosphate-buffered saline. Finally, resuspended blood is smeared onto a glass slide and thermally fixed via hovering over a Bunsen burner flame. <a href="https://jove.unicartagenaproxy.elogim.com/files/ftp_upload/64843/64843fig02large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
Table 1: Preparation and storage conditions for solutions necessary for immunohistochemical staining. The solution can be prepared prior to the protocol. <a href="https://jove.unicartagenaproxy.elogim.com/files/ftp_upload/64843/Table 1_RE.xlsx" target="_blank">Please click here to download this Table.</a>
Table 2: Description of antibody solutions for immediate use. <a href="https://jove.unicartagenaproxy.elogim.com/files/ftp_upload/64843/Table 2_RE.xlsx" target="_blank">Please click here to download this Table.</a>
Table 3: Components and protocol to prepare DAB solution for immediate use. <a href="https://jove.unicartagenaproxy.elogim.com/files/ftp_upload/64843/Table 3_RE.xlsx" target="_blank">Please click here to download this Table.</a>
2. Fluorescent labelling of RBC proteins
NOTE: The following section outlines an adaptation of the immunohistochemical protocol, developed with the aim of enabling the use of antibodies with fluorescent conjugates (Figure 1).
Blood sample preparation for the immunofluorescence protocol is identical to that described in section 1, so the following section commences from the staining of samples.
<ol>
	<li>Immunofluorescence staining
	<ol>
		<li>Incubate with the secondary, fluorescent conjugated antibody (for the volume, see step 1.4.2) for 30 min at RT protected from light, using either a purpose-built incubation chamber or aluminum foil.</li>
		<li>Pour off the secondary antibody solution and wash the samples 3x with TBS. Leave the final wash on the samples to prevent them from drying out.</li>
		<li>Pour off the TBS and remove the samples from the sample rack one at a time to prevent prolonged light exposure. For dehydrating the samples, expose the slides to different ethanol solutions for ~5 s each, starting with 70%, followed by 90%, and finally 100%. Expose the slides to xylol/xylene solution for 5 s.</li>
		<li>Prepare a coverslip with two or three drops of mounting medium and then mount the slide with the coverslip. Ensure even distribution of the mounting medium by applying light pressure with tweezers or a similar, sterile metal instrument. Eliminate air bubbles, which may otherwise interfere with imaging, with the same instrument. Leave the samples to dry overnight in a dark and dry space.</li>
	</ol>
	</li>
	<li>Microscopic evaluation
	<ol>
		<li>For visualization and imaging, place the slide on the microscope stage with a total magnification of at least 400x. Turn on the microscope light source and the fluorescent light source, ensuring that the fluorescent light source is adjusted to maximal intensity.</li>
		<li>Turn on the microscope-attached camera and start the microscope control software. Use brightfield microscopy to determine the appropriate focus by turning the coarse and fine focus adjustment knobs, and finding the level of focus where RBCs are visible. 
		NOTE: Excessive exposure to light may cause photobleaching of the fluorescent conjugates. One may use a slide from a previous experiment for this purpose, to minimize light exposure of the slides that are yet to be analyzed.</li>
		<li>Determine optimal laser intensity by inspecting RBCs in the control area. Ensure that the intensity is high enough that RBCs are visible, while not producing a large background signal. Keep the intensity and exposure time consistent between areas and samples to ensure comparability.</li>
		<li>Capture brightfield and fluorescent images in at least three distinct areas of the test area of the slide, selected at random. To select an area, pan away from the edges of the slide that are marked by the lipid pen, using the microscope stage controls. Select an area that exhibits uniform distribution of a singular RBC layer.</li>
		<li>Set the exposure time to 1 s for fluorescent images and capture an image using the software controls of the microscope control software. Switch to brightfield mode, set the exposure time to &#39;Auto&#39;, and capture the corresponding brightfield image.</li>
		<li>Capture brightfield and fluorescent images in at least two distinct randomly selected areas of the control area of the slide by repeating step 2.2.3.</li>
		<li>Save the images in .tif format to preserve the original gray values of pixels, prevent compression, and carry metadata of the acquisition.</li>
		<li>Measure the gray values of the captured RBCs. Open ImageJ (or FIJI21; see Supplementary File 1). Determine the gray values of individual RBCs. To this end, mark each individual cell with the Oval selection tool, and analyze using the Measure command. 
		NOTE: RBCs should not be analyzed if they overlap with other cells, as this may increase the resultant signal.</li>
		<li>Highlight between three and five areas free of RBCs and determine the gray values to provide a measure of background signal. Analyze at least 150 RBCs from at least three distinct images for each test area, and at least 50 RBCs from at least two distinct images for each control area. 
		NOTE: Analysis of more cells/areas may be advised to minimize variability. Given that the RBC population is inherently heterogenous, cell-cell variability in signal may be significant, depending on the protein of interest.</li>
		<li>Perform alternative data analysis of captured images using macro command. Create/install a macro command through the FIJI release of ImageJ for automated selection, background correction, and gray value analysis of a given image. 
		NOTE: This routine uses automated thresholding to detect the cells present in a given image using a copy of the original image, producing an overlay that is imposed onto the original image to extract gray values of fluorescent RBCs. The macro is deposited as a .ijm file, as Supplementary Coding File 1.</li>
		<li>Open the image file in .tif format ready for analysis in FIJI. Open the RBC fluorescence.ijm (Supplementary Coding File 1) macro and click Run. 
		NOTE: The macro is set up for images obtained with 600x magnification and a large signal-to-noise ratio. Automatic selection of cells should be reviewed by the investigator.</li>
	</ol>
	</li>
	<li>Compute the final signals as: 
	(test area RBC - test area background) - (control area RBC - control area background) for manual analysis; 
	(test area - control area) for automated analysis.</li>
</ol>

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A., Brinkmann, C., Bloch, W., Grau, M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Increase+in+red+blood+cell-nitric+oxide+synthase+dependent+nitric+oxide+production+during+red+blood+cell+aging+in+health+and+disease:+a+study+on+age+dependent+changes+of+rheologic+and+enzymatic+properties+in+red+blood+cells.">Increase in red blood cell-nitric oxide synthase dependent nitric oxide production during red blood cell aging in health and disease: a study on age dependent changes of rheologic and enzymatic properties in red blood cells.</a> PLoS One. 10 (4), 0125206 (2015).</li><li>Di Pietro, N., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Nitric+oxide+synthetic+pathway+and+cGMP+levels+are+altered+in+red+blood+cells+from+end-stage+renal+disease+patients.">Nitric oxide synthetic pathway and cGMP levels are altered in red blood cells from end-stage renal disease patients.</a> Molecular and Cellular Biochemistry. 417 (1-2), 155-167 (2016).</li><li>Grau, M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Even+patients+with+mild+COVID-19+symptoms+after+SARS-CoV-2+infection+show+prolonged+altered+red+blood+cell+morphology+and+rheological+parameters.">Even patients with mild COVID-19 symptoms after SARS-CoV-2 infection show prolonged altered red blood cell morphology and rheological parameters.</a> Journal of Cellular and Molecular Medicine. 26 (10), 3022-3030 (2022).</li><li>Mozar, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Red+blood+cell+nitric+oxide+synthase+modulates+red+blood+cell+deformability+in+sickle+cell+anemia.">Red blood cell nitric oxide synthase modulates red blood cell deformability in sickle cell anemia.</a> Clinical Hemorheology and Microcirculation. 64 (1), 47-53 (2016).</li><li>Ulker, P., Gunduz, F., Meiselman, H. J., Baskurt, O. K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Nitric+oxide+generated+by+red+blood+cells+following+exposure+to+shear+stress+dilates+isolated+small+mesenteric+arteries+under+hypoxic+conditions.">Nitric oxide generated by red blood cells following exposure to shear stress dilates isolated small mesenteric arteries under hypoxic conditions.</a> Clinical Hemorheology and Microcirculation. 54 (4), 357-369 (2013).</li><li>Nader, E., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Hydroxyurea+therapy+modulates+sickle+cell+anemia+red+blood+cell+physiology:+Impact+on+RBC+deformability,+oxidative+stress,+nitrite+levels+and+nitric+oxide+synthase+signalling+pathway.">Hydroxyurea therapy modulates sickle cell anemia red blood cell physiology: Impact on RBC deformability, oxidative stress, nitrite levels and nitric oxide synthase signalling pathway.</a> Nitric Oxide: Biology and Chemistry. 81, 28-35 (2018).</li><li>Fischer, U. M., Schindler, R., Brixius, K., Mehlhorn, U., Bloch, W. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Extracorporeal+circulation+activates+endothelial+nitric+oxide+synthase+in+erythrocytes.">Extracorporeal circulation activates endothelial nitric oxide synthase in erythrocytes.</a> The Annals of Thoracic Surgery. 84 (6), 2000-2003 (2007).</li><li>Horobin, J. T., Sabapathy, S., Kuck, L., Simmonds, M. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Shear+stress+and+RBC-NOS+Serine1177+Phosphorylation+in+humans:+a+dose+response.">Shear stress and RBC-NOS Serine1177 Phosphorylation in humans: a dose response.</a> Life. 11 (1), 36 (2021).</li><li>Kuck, L., Grau, M., Simmonds, M. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Recovery+time+course+of+erythrocyte+deformability+following+exposure+to+shear+is+dependent+upon+conditioning+shear+stress.">Recovery time course of erythrocyte deformability following exposure to shear is dependent upon conditioning shear stress.</a> Biorheology. 54 (5-6), 141-152 (2018).</li><li>Grau, M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Effect+of+acute+exercise+on+RBC+deformability+and+RBC+nitric+oxide+synthase+signalling+pathway+in+young+sickle+cell+anaemia+patients.">Effect of acute exercise on RBC deformability and RBC nitric oxide synthase signalling pathway in young sickle cell anaemia patients.</a> Scientific Reports. 9 (1), 11813 (2019).</li><li>Feelisch, M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> Methods in Nitric Oxide Research. , (1998).</li><li>Cortese-Krott, M. M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Human+red+blood+cells+at+work:+identification+and+visualization+of+erythrocytic+eNOS+activity+in+health+and+disease.">Human red blood cells at work: identification and visualization of erythrocytic eNOS activity in health and disease.</a> Blood>. 120 (20), 4229-4237 (2012).</li></ol>

All authors have disclosed that there are no conflicts of interest.

Recent literature highly suggests that the RBC-NOS protein is of crucial importance for the regulation of RBC deformability15,22,23, which in turn facilitates their passage through narrow capillaries24. Protein activity highly depends on post-translational protein modifications, particularly the phosphorylation of certain residues18. The focus of interest lies in the phosphorylatio...

Red blood cells (RBCs) traverse the cardiovascular system for 70 to 140 days, with a mean RBC age of approximately 115 days1,2. Senescent or damaged RBCs are removed from the circulation by erythrophagocytosis, an efficient clearing process driven by macrophages3. The predetermined lifespan of these cells is one consequence of surrendering the cell organelles, including the nucleus, mitochondria, and ribosomes, during differentiation and maturation4. Thus, circulating RBCs are devoid of a translational machinery, precluding the synthesis of new proteins3. It follows that dynamic, post-translational modifications to existing proteins represent the only viable mechanism of acute, biochemical regulation in response to extracellular and intracellular stressors acting on RBCs5.
Mechanical forces appear to be chief extracellular cues that cause the activation or modulation of biochemical pathways within RBCs. The discovery of the mechanosensitive protein, Piezo1, in RBC membranes6 inspired several lines of research investigating mechanically-activated signaling in these cells7. For example, recent advances have shown that the physical properties of RBCs are actively regulated by acute and dynamic changes of proteins8, which includes post-translational phosphorylation and ubiquitination9. Since these normal modifications differ in certain diseases9,10,11, it seems to be of scientific and clinical interest to determine the activation state of RBC proteins, specifically in relation to mechanobiological processes.
The determination of acute changes in RBC protein activation states poses some methodological challenges. For instance, the storage of RBC samples for later analysis requires preservation of the modified RBC proteins, as post-translational modifications are non-durable. Moreover, classic protein-detection methods (e.g., western blotting) are notoriously difficult to standardize in RBCs due to the low abundance of proteins relative to hemoglobin, which accounts for ~98% of the protein content in these cells12. Thus, antibody-based staining of chemically-preserved RBCs has been the method of choice when investigating acute modifications of important RBC proteins, such as the RBC-specific isoform of nitric oxide synthase (RBC-NOS)13,14. RBC-NOS has been shown to enzymatically produce nitric oxide (NO), which seems indispensable for essential RBC properties, including RBC deformability15,16,17. Post-translational modifications of RBC-NOS regulate catalytic enzyme activity, with phosphorylation of the serine 1177 residue being described to increase enzyme activity, while phosphorylation of the residues serine 114 or threonine 495 have been linked with decreased RBC-NOS activity18,19.
Collectively, temporary modifications of RBC proteins contribute to important cellular function, and standardized protocols that enable detection of these modified proteins are of high value. Here, we present two distinct protocols that exploit specific antibodies to facilitate the detection of RBC-NOS protein activation, and discuss recommendations for data analysis and interpretation.
Performance of the described protocols was assessed by measuring the well-reported increase in the phosphorylation of RBC-NOS at the serine 1177 residue in response to mechanical forces reflective of those occurring within the human vasculature (5 Pa).

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			<td>3,3&#8242;-Diaminobenzidin -tetrahydrochloride Hydrate</td>
			<td>Sigma/Merck</td>
			<td>D5637</td>
			<td>DAB</td>
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		<tr>
			<td>Ammoniumchloride&#160;</td>
			<td>Merck /Millipore</td>
			<td>101145</td>
			<td>NH4Cl</td>
		</tr>
		<tr>
			<td>Centrifuge 5427 R&#160;</td>
			<td>Eppendorf</td>
			<td>5409000010</td>
			<td></td>
		</tr>
		<tr>
			<td>Coverslips</td>
			<td>VWR</td>
			<td>631-0147&#160;</td>
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			<td>di-sodium Hydrogen Phosphate Dihydrate&#160;</td>
			<td>Merck /Millipore</td>
			<td>106580</td>
			<td>Na2HPO4. 2 H2O</td>
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			<td>Disposable transfer pipettes</td>
			<td>VWR</td>
			<td>612-6803</td>
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		<tr>
			<td>Entellan</td>
			<td>Merck /Millipore</td>
			<td>107961</td>
			<td>rapid mounting medium for microscopy</td>
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			<td>Ethanol denaturated using 1 % methyl ethyl ketone (MEK)</td>
			<td>Hofmann</td>
			<td>642</td>
			<td></td>
		</tr>
		<tr>
			<td>Glucose-Oxidase</td>
			<td>Sigma/Merck</td>
			<td>G2133</td>
			<td></td>
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		<tr>
			<td>Grease pencil&#160;</td>
			<td>Dako</td>
			<td>S 2002</td>
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		<tr>
			<td>Horse-radish peroxidase/ExtrAvidin&#8722;Peroxidase</td>
			<td>Sigma/Merck</td>
			<td>E-2886</td>
			<td>HRP</td>
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		<tr>
			<td>Hydrochloric acid&#160;</td>
			<td>Merck /Millipore</td>
			<td>109057</td>
			<td>HCl</td>
		</tr>
		<tr>
			<td>Hydrogen peroxide, 30%</td>
			<td>Merck /Millipore</td>
			<td>107203</td>
			<td>H2O2</td>
		</tr>
		<tr>
			<td>ImageJ Software</td>
			<td>Freeware</td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>Laser-assisted optical rotational cell analyser (LORCA)</td>
			<td>RR Mechatronics</td>
			<td></td>
			<td>Ektacytometer instrument used for shearing</td>
		</tr>
		<tr>
			<td>Methanol</td>
			<td>Merck /Millipore</td>
			<td>106009</td>
			<td></td>
		</tr>
		<tr>
			<td>Microscope slides</td>
			<td>VWR</td>
			<td>630-1985</td>
			<td></td>
		</tr>
		<tr>
			<td>Nickel(II)-sulfate Hexahydrate&#160;</td>
			<td>Sigma/Merck</td>
			<td>N4882</td>
			<td>NiSO4.6H2O</td>
		</tr>
		<tr>
			<td>Normal Goat serum</td>
			<td>Agilent/DAKO</td>
			<td>X0907</td>
			<td>NGS</td>
		</tr>
		<tr>
			<td>Paraformaldehyde</td>
			<td>Merck /Millipore</td>
			<td>818715</td>
			<td>PFA</td>
		</tr>
		<tr>
			<td>Pipettes Eppendorf Reference 2</td>
			<td>VWR</td>
			<td>613-5836/ 613-5839</td>
			<td></td>
		</tr>
		<tr>
			<td>Rabbit Anti-phospho eNOS Antibody (Ser1177)</td>
			<td>Merck/Millipore</td>
			<td>07-428-I</td>
			<td>Primary Antibody</td>
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		<tr>
			<td>Reaction tubes, 2ml</td>
			<td>Eppendorf</td>
			<td>30120094</td>
			<td></td>
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		<tr>
			<td>Secondary Antibody goat anti rabbit</td>
			<td>Agilent/DAKO</td>
			<td>E0432</td>
			<td>Secondary Antibody</td>
		</tr>
		<tr>
			<td>Skim milk powder</td>
			<td>Bio-Rad</td>
			<td>170-6404</td>
			<td></td>
		</tr>
		<tr>
			<td>Sodium chloride&#160;</td>
			<td>Merck /Millipore</td>
			<td>106404</td>
			<td>NaCl</td>
		</tr>
		<tr>
			<td>Sodium Dihydrogen Phosphate Monohydrate</td>
			<td>Merck /Millipore</td>
			<td>106346</td>
			<td>NaH2PO4.H2O</td>
		</tr>
		<tr>
			<td>Sodium hydroxide, 1 M</td>
			<td>Merck /Millipore</td>
			<td>150706</td>
			<td>NaOH</td>
		</tr>
		<tr>
			<td>Tris(hydroxymethyl)-aminomethane</td>
			<td>Merck /Millipore</td>
			<td>108382</td>
			<td>Tris</td>
		</tr>
		<tr>
			<td>Trypsin</td>
			<td>Sigma/Merck</td>
			<td>T7409</td>
			<td></td>
		</tr>
		<tr>
			<td>Tween20&#160;</td>
			<td>Merck /Millipore</td>
			<td>822184</td>
			<td></td>
		</tr>
		<tr>
			<td>Whatman Glas microfiber filter, quality GF/F</td>
			<td>Merck /Millipore</td>
			<td>WHA1825047</td>
			<td></td>
		</tr>
		<tr>
			<td>Xylol</td>
			<td>VWR Chemicals</td>
			<td>2,89,73,465</td>
			<td></td>
		</tr>
		<tr>
			<td>&#223;-D-Glucose monohydrate</td>
			<td>Merck /Millipore</td>
			<td>14431-43-7</td>
			<td></td>
		</tr>
	</tbody>
</table>

immunostaining-based detection of dynamic alterations in red blood cell proteins

Antibody labeling of red blood cell (RBC) proteins is a commonly used, semi-quantitative method to detect changes in overall protein content or acute alterations in protein activation states. It facilitates the assessment of RBC treatments, characterization of differences in certain disease states, and description of cellular coherencies. The detection of acutely altered protein activation (e.g., through mechanotransduction) requires adequate sample preparation to preserve otherwise temporary protein modifications. The basic principle includes immobilizing the target binding sites of the desired RBC proteins to enable the initial binding of specific primary antibodies. The sample is further processed to guarantee optimal conditions for the binding of the secondary antibody to the corresponding primary antibody. The selection of non-fluorescent secondary antibodies requires additional treatment, including biotin-avidin coupling and the application of 3,3-diaminobenzidine-tetrahydrochloride (DAB) to develop the staining, which needs to be controlled in real-time under a microscope in order to stop the oxidation, and thus staining intensity, on time. For staining intensity detection, images are taken using a standard light microscope. In a modification of this protocol, a fluorescein-conjugated secondary antibody can be applied instead, which has the advantage that no further development step is necessary. This procedure, however, requires a fluorescence objective attached to a microscope for staining detection. Given the semi-quantitative nature of these methods, it is imperative to provide several control stains to account for non-specific antibody reactions and background signals. Here, we present both staining protocols and the corresponding analytical processes to compare and discuss the respective results and advantages of the different staining techniques.

The presented protocol, describing methods that facilitate the detection of acute alterations in RBC proteins, was tested on a well-known mechanically sensitive protein alteration: phosphorylation of RBC-NOS at the serine 1177 residue. Whole blood was obtained from healthy volunteers and subsequently split into two separate aliquots. A given blood sample was exposed to mechanical shear stress of physiological magnitude (5 Pa) for 300 s, which was previously shown to elicit RBC-NOS phosphorylation at serine 1177<sup class...

Watch this Scientific Journal Video about Immunostaining-Based Detection of Dynamic Alterations in Red Blood Cell Proteins at JoVE.com

Immunostaining-Based Detection of Dynamic Alterations in Red Blood Cell Proteins

Capturing dynamic changes in the protein activation of enucleated red blood cells poses methodological challenges, like the preservation of dynamic changes to acute stimuli for later assessment. The presented protocol describes sample preparation and staining techniques that enable preservation and analysis of relevant protein changes and subsequent detection.

Antibody labeling of red blood cell (RBC) proteins is a commonly used, semi-quantitative method to detect changes in overall protein content or acute ...

immunostaining-based-detection-dynamic-alterations-red-blood-cell

Universidad de Cartagena UDEC

Research

JoVE Journal

Biochemistry

994 Views.  German Sport University Cologne. Capturing dynamic changes in the protein activation of enucleated red blood cells poses methodological challenges, like the preservation of dynamic changes to acute stimuli for later assessment. The presented protocol describes sample preparation and staining techniques that enable preservation and analysis of relevant protein changes and subsequent detection.

Video: Immunostaining-Based Detection of Dynamic Alterations in Red Blood Cell Proteins

Detection of Detergent-sensitive Interactions Between Membrane Proteins

Our ability to explore protein-protein interactions is the key to understanding regulatory connections in the cell. However, detection of protein-protein interactions in many cases is associated with significant experimental challenges. In particular, sorting receptors interact with their protein cargo in the lumen of the membrane compartments often in a detergent-sensitive fashion, making co-immunoprecipitation of these proteins unusable. Binding of the sorting receptor sortilin to glucose transporter GLUT4 may serve as an example of weak luminal interactions between membrane proteins. Here, we describe a fast, simple, and inexpensive assay to validate the interaction between sortilin and GLUT4. For that, we have designed and chemically synthesized the myc-tagged peptide corresponding to the potential sortilin-binding epitope in the luminal part of GLUT4. Sortilin tagged with six histidines was expressed in mammalian cells, and isolated from cell lysates using Cobalt beads. Sortilin immobilized on the beads was incubated with the peptide solution at different pH values, and the eluted material was analyzed by Western blotting. This assay can be easily adapted to study other detergent-sensitive protein-protein interactions.

We describe a protocol for detection of detergent-sensitive interactions between membrane proteins using binding of the sorting receptor, sortilin, to the first luminal loop of the glucose transporter protein, GLUT4, as an example.

Our ability to explore protein-protein interactions is the key to understanding regulatory connections in the cell. However, detection of protein-protein ...

Isolation of Glomeruli and In Vivo Labeling of Glomerular Cell Surface Proteins

Proteinuria results from the disruption of the glomerular filter that is composed of the fenestrated endothelium, glomerular basement membrane, and podocytes with their slit diaphragms. The delicate structure of the glomerular filter, especially the slit diaphragm, relies on the interplay of diverse cell surface proteins. Studying these cell surface proteins has so far been limited to in vitro studies or histologic analysis. Here, we present a murine in vivo biotinylation labeling method, which enables the study of glomerular cell surface proteins under physiologic and pathophysiologic conditions. This protocol contains information on how to perfuse mouse kidneys, isolate glomeruli, and perform endogenous immunoprecipitation of a protein of interest. Semi-quantitation of glomerular cell surface abundance is readily available with this novel method, and all proteins accessible to biotin perfusion and immunoprecipitation can be studied. In addition, isolation of glomeruli with or without biotinylation enables further analysis of glomerular RNA and protein as well as primary glomerular cell culture (i.e., primary podocyte cell culture).

Isolation of Glomeruli and In Vivo Labeling of Glomerular Cell Surface Proteins

Here we present a protocol for murine in vivo labeling of glomerular cell surface proteins with biotin. This protocol contains information on how to perfuse mouse kidneys, isolate glomeruli, and perform endogenous immunoprecipitation of the protein of interest.

Proteinuria results from the disruption of the glomerular filter that is composed of the fenestrated endothelium, glomerular basement membrane, and ...

Study on the Metabolism of Six Systemic Insecticides in a Newly Established Cell Suspension Culture Derived from Tea (Camellia Sinensis L.) Leaves

A platform for studying insecticide metabolism using in vitro tissues of tea plant was developed. Leaves from sterile tea plantlets were induced to form loose callus on Murashige and Skoog (MS) basal media with the plant hormones 2,4-dichlorophenoxyacetic acid (2,4-D, 1.0 mg L-1) and kinetin (KT, 0.1 mg L-1). Callus formed after 3 or 4 rounds of subculturing, each lasting 28 days. Loose callus (about 3 g) was then inoculated into B5 liquid media containing the same plant hormones and was cultured in a shaking incubator (120 rpm) in the dark at 25 &#177; 1 &#176;C. After 3&#8722;4 subcultures, a cell suspension derived from tea leaf was established at a subculture ratio ranging between 1:1 and 1:2 (suspension mother liquid: fresh medium). Using this platform, six insecticides (5 &#181;g mL-1 each thiamethoxam, imidacloprid, acetamiprid, imidaclothiz, dimethoate, and omethoate) were added into the tea leaf-derived cell suspension culture. The metabolism of the insecticides was tracked using liquid chromatography and gas chromatography. To validate the usefulness of the tea cell suspension culture, the metabolites of thiamethoxan and dimethoate present in treated cell cultures and intact plants were compared using mass spectrometry. In treated tea cell cultures, seven metabolites of thiamethoxan and two metabolites of dimethoate were found, while in treated intact plants, only two metabolites of thiamethoxam and one of dimethoate were found. The use of a cell suspension simplified the metabolic analysis compared to the use of intact tea plants, especially for a difficult matrix such as tea.

Study on the Metabolism of Six Systemic Insecticides in a Newly Established Cell Suspension Culture Derived from Tea Camellia Sinensis L. Leaves

This work presents a protocol for establishing a cell suspension culture derived from tea (Camellia sinensis L.) leaves that can be used to study the metabolism of external compounds that can be taken up by the whole plant, such as insecticides.

A platform for studying insecticide metabolism using in vitro tissues of tea plant was developed. Leaves from sterile tea plantlets were induced to form ...

Translating Ribosome Affinity Purification (TRAP) for RNA Isolation from Endothelial Cells In Vivo

Many studies have been limited to using in vitro cellular assays and whole tissues or isolating of specific cell types from animals for in vitro analysis of transcriptome and gene expression by qPCR and RNA sequencing. Comprehensive transcriptome and gene expression analysis of specific cell types in complex tissues and organs will be critical to understand cellular and molecular mechanisms by which genes are regulated and their association with tissue homeostasis and organ functions. In this article, we demonstrate the methodology for isolation of ribosome-bound RNA directly in vivo in the vascular endothelia of animal lungs as an example. The specific materials and procedures for tissue processing and RNA purification will be described, including the assessment of RNA quality and yield as well as real time qPCR for arteriogenic gene assays. This approach, known as translating ribosome affinity purification (TRAP) technique, can be utilized for characterization of gene expression and transcriptome analysis of certain cell types directly in vivo in any specific type in complex tissues.

Translating Ribosome Affinity Purification TRAP for RNA Isolation from Endothelial Cells In Vivo

We present an approach to purify ribosome-bound mRNA from vascular endothelial cells (ECs) directly in mouse brain, lung and heart tissues via EC-specific genetic tag of enhanced green fluorescence protein (EGFP)in ribosomes in combination with RNA purification.

Many studies have been limited to using in vitro cellular assays and whole tissues or isolating of specific cell types from animals for in vitro analysis ...

SUMO-Binding Entities (SUBEs) as Tools for the Enrichment, Isolation, Identification, and Characterization of the SUMO Proteome in Liver Cancer

Post-translational modification is a key mechanism regulating protein homeostasis and function in eukaryotic cells. Among all ubiquitin-like proteins in liver cancer, the modification by SUMO (Small Ubiquitin MOdifier) has been given the most attention. Isolation of endogenous SUMOylated proteins in vivo is challenging due to the presence of active SUMO-specific proteases. Initial studies of SUMOylation in vivo were based on the molecular detection of specific SUMOylated proteins (e.g., by western blot). However, in many cases, antibodies, generally made with non-modified recombinant protein, did not immunoprecipitate SUMOylated forms of the protein of interest.&#160;Nickel chromatography has been the other approach to study SUMOylation by capturing histidine-tagged versions of SUMO molecules. This approach is mainly used in cells stably expressing or transiently transfected with His-SUMO molecules. To overcome these limitations, SUMO-binding entities (SUBEs) were developed to isolate endogenous SUMOylated proteins. Herein, we describe all the steps required for the enrichment, isolation, and identification of SUMOylated substrates from human hepatoma cells and hepatic tissues from a liver cancer mouse model by using SUBEs. Firstly, we describe methods involved in the preparation and lysis of the human hepatoma cells and liver tumor tissue samples. Then, a thorough explanation of the preparation of SUBEs and controls is detailed along with the protocol for the protein pull-down assays. Finally, some examples are provided regarding the options available for the identification and characterization of the SUMOylated proteome, namely the use of western-blot analysis for the detection of a specific SUMOylated substrate from liver tumors or the use of proteomics by mass spectrometry for high-throughput characterization of the SUMOylated proteome and interactome in hepatoma cells.

SUMO-Binding Entities SUBEs as Tools for the Enrichment, Isolation, Identification, and Characterization of the SUMO Proteome in Liver Cancer

Here, we present a protocol to enrich, isolate, identify, and characterize proteins modified by SUMO in vivo both from human hepatoma cells and liver tumors obtained from mouse models of hepatocellular carcinoma by using SUMO-binding entities (SUBEs).

Post-translational modification is a key mechanism regulating protein homeostasis and function in eukaryotic cells. Among all ubiquitin-like proteins in ...

Induction of Eryptosis in Red Blood Cells Using a Calcium Ionophore

Eryptosis, erythrocyte programmed cell death, occurs in a number of hematological diseases and during injury to erythrocytes. A hallmark of eryptotic cells is the loss of compositional asymmetry of the cell membrane, leading to the translocation of phosphatidylserine to the membrane outer leaflet. This process is triggered by increased intracellular concentration of Ca2+, which activates scramblase, an enzyme that facilitates bidirectional movement of phospholipids between membrane leaflets. Given the importance of eryptosis in various diseased conditions, there have been efforts to induce eryptosis in vitro. Such efforts have generally relied on the calcium ionophore, ionomycin, to enhance intracellular Ca2+ concentration and induce eryptosis. However, many discrepancies have been reported in the literature regarding the procedure for inducing eryptosis using ionomycin. Herein, we report a step-by-step protocol for ionomycin-induced eryptosis in human erythrocytes. We focus on important steps in the procedure including the ionophore concentration, incubation time, and glucose depletion, and provide representative result. This protocol can be used to reproducibly induce eryptosis in the laboratory.

A protocol for the induction of eryptosis, programmed cell death in erythrocytes, using the calcium ionophore, ionomycin, is provided. Successful eryptosis is evaluated by monitoring the localization phosphatidylserine in the membrane outer leaflet. Factors affecting the success of the protocol have been examined and optimal conditions provided.

Eryptosis, erythrocyte programmed cell death, occurs in a number of hematological diseases and during injury to erythrocytes. A hallmark of eryptotic ...

Characterizing Cellular Proteins with In-cell Fast Photochemical Oxidation of Proteins

Fast photochemical oxidation of proteins (FPOP) is a hydroxyl radical protein footprinting method used to characterize protein structure and interactions. FPOP uses a 248 nm excimer laser to photolyze hydrogen peroxide producing hydroxyl radicals. These radicals oxidatively modify solvent exposed side chains of 19 of the 20 amino acids. Recently, this method has been used in live cells (IC-FPOP) to study protein interactions in their native environment. The study of proteins in cells accounts for intermolecular crowding and various protein interactions that are disrupted for in vitro studies. A custom single cell flow system was designed to reduce cell aggregation and clogging during IC-FPOP. This flow system focuses the cells past the excimer laser individually, thus ensuring consistent irradiation. By comparing the extent of oxidation produced from FPOP to the protein&#39;s solvent accessibility calculated from a crystal structure, IC-FPOP can accurately probe the solvent accessible side chains of proteins.

Here, we characterize protein structure and interaction sites in living cells using a protein footprinting technique termed in-cell fast photochemical oxidation of proteins (IC-FPOP).

Fast photochemical oxidation of proteins (FPOP) is a hydroxyl radical protein footprinting method used to characterize protein structure and interactions. ...

Transverse Sectioning of Mature Rice (Oryza sativa L.) Kernels for Scanning Electron Microscopy Imaging Using Pipette Tips as Immobilization Support

Starch granules (SGs) exhibit different morphologies depending on the plant species, especially in the endosperm of the Poaceae family. Endosperm phenotyping can be used to classify genotypes based on SG morphotype using scanning electron microscopic (SEM) analysis. SGs can be visualized using SEM by slicing through the kernel (pericarp, aleurone layers, and endosperm) and exposing the organellar contents. Current methods require the rice kernel to be embedded in plastic resin and sectioned using a microtome or embedded in a truncated pipette tip and sectioned by hand using a razor blade. The former method requires specialized equipment and is time-consuming, while the latter introduces a new host of problems depending on rice genotype. Chalky rice varieties, particularly, pose a problem for this type of sectioning due to the friable nature of their endosperm tissue. Presented here is a technique for preparing translucent and chalky rice kernel sections for microscopy, requiring only pipette tips and a scalpel blade. Preparing the sections within the confines of a pipette tip prevents rice kernel endosperm from shattering (for translucent or &#8216;vitreous&#8217; phenotypes) and crumbling (for chalky phenotypes). Using this technique, endosperm cell patterning and the structure of intact SGs can be observed.

Transverse Sectioning of Mature Rice Oryza sativa L. Kernels for Scanning Electron Microscopy Imaging Using Pipette Tips as Immobilization Support

This protocol allows for the preparation of transverse sections of cereal seeds (e.g., rice) for the analysis of endosperm and starch granule morphology using scanning electron microscopy.

Starch granules (SGs) exhibit different morphologies depending on the plant species, especially in the endosperm of the Poaceae family. Endosperm ...

Myosin-Specific Adaptations of In vitro Fluorescence Microscopy-Based Motility Assays

Myosin proteins bind and interact with filamentous actin (F-actin) and are found in organisms across the phylogenetic tree. Their structure and enzymatic properties are adapted for the particular function they execute in cells. Myosin 5a processively walks on F-actin to transport melanosomes and vesicles in cells. Conversely, nonmuscle myosin 2b operates as a bipolar filament containing approximately 30 molecules. It moves F-actin of opposite polarity toward the center of the filament, where the myosin molecules work asynchronously to bind actin, impart a power stroke, and dissociate before repeating the cycle. Nonmuscle myosin 2b, along with its other nonmuscle myosin 2 isoforms, has roles that include&#160;cell adhesion, cytokinesis, and tension maintenance. The mechanochemistry of myosins can be studied by performing in vitro motility assays using purified proteins. In the gliding actin filament assay, the myosins are bound to a microscope coverslip surface and translocate fluorescently labeled F-actin, which can be tracked. In the single molecule/ensemble motility assay, however, F-actin is bound to a coverslip and the movement of fluorescently labeled myosin molecules on the F-actin is observed. In this report, the purification of recombinant myosin 5a from Sf9 cells using affinity chromatography is outlined. Following this, we outline two fluorescence microscopy-based assays: the gliding actin filament assay and the inverted motility assay. From these assays, parameters such as actin translocation velocities and single molecule run lengths and velocities can be extracted using the image analysis software. These techniques can also be applied to study the movement of single filaments of the nonmuscle myosin 2 isoforms, discussed herein in the context of nonmuscle myosin 2b. This workflow represents a protocol and a set of quantitative tools that can be used to study the single molecule and ensemble dynamics of nonmuscle myosins.

Presented here is a procedure to express and purify myosin 5a followed by a discussion of its characterization, using both ensemble and single molecule in vitro fluorescence microscopy-based assays, and how these methods can be modified for the characterization of nonmuscle myosin 2b.

Myosin proteins bind and interact with filamentous actin (F-actin) and are found in organisms across the phylogenetic tree. Their structure and enzymatic ...

F&#246;rster Resonance Energy Transfer Measurements in Living Plant Cells

Sensitized emission-based F&#246;rster resonance energy transfer (FRET) experiments are easily done but depend on the microscopic setup. Confocal laser scanning microscopes have become a workhorse for biologists. Commercial systems offer high flexibility in laser power adjustment and detector sensitivity and often combine different detectors to obtain the perfect image. However, the comparison of intensity-based data from different experiments and setups is often impossible due to this flexibility. Biologist-friendly procedures are of advantage and allow for simple and reliable adjustment of laser and detector settings. 
Furthermore, as FRET experiments in living cells are affected by the variability in protein expression and donor-acceptor ratios, protein expression levels must be considered for data evaluation. Described here is a simple protocol for reliable and reproducible FRET measurements, including routines for the estimation of protein expression and adjustment of laser intensity and detector settings. Data evaluation will be performed by calibration with a fluorophore fusion of known FRET efficiency. To improve simplicity, correction factors have been compared that have been obtained in cells and by measuring recombinant fluorescent proteins.

A protocol is provided for setting up a standard confocal laser-scanning microscope for in vivo F&#246;rster resonance energy transfer measurements, followed by data evaluation.

Sensitized emission-based F&#246;rster resonance energy transfer (FRET) experiments are easily done but depend on the microscopic setup. Confocal laser ...

Immunostaining-Based Detection of Dynamic Alterations in Red Blood Cell Proteins

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SUMO-Binding Entities (SUBEs) as Tools for the Enrichment, Isolation, Identification, and Characterization of the SUMO Proteome in Liver Cancer

Induction of Eryptosis in Red Blood Cells Using a Calcium Ionophore

Characterizing Cellular Proteins with In-cell Fast Photochemical Oxidation of Proteins

Transverse Sectioning of Mature Rice (Oryza sativa L.) Kernels for Scanning Electron Microscopy Imaging Using Pipette Tips as Immobilization Support

Myosin-Specific Adaptations of In vitro Fluorescence Microscopy-Based Motility Assays

Förster Resonance Energy Transfer Measurements in Living Plant Cells