Bu çalışma, Slovenya Araştırma Ajansı (proje J2-9764 ve program P2-0249) tarafından desteklenmiştir. Bu video &quot;Elektroporasyon tabanlı Teknolojileri ve Tedaviler&quot;, Slovenya Ljubljana Üniversitesi Elektrik Mühendisliği Fakültesi tarafından düzenlenen bilimsel atölye ve lisansüstü ders, ek malzeme temsil eder.

I. Hücre izci CMFDA ve CMRA hücreleri yükleme <ol><li> Fare melanom hücre hattı (B16-F1) önceden hazırlanmış hücreleri üzerinde deneyler yapıldı. Hücreler% 70-80% 10 fetal sığır serumu, 0.15 mg / ml &#39;lik L-glutamin, 16 mg ile desteklenmiş DMEM kültür ortamı izdiham (Dulbecco&#39;nun modifiye Eagle orta) için iki ayrı 25 cm 2 kültür şişeler (DYP, ZDA ) yetiştirilen / ml gentamisin (Sigma-Aldrich, Almanya), 200 adet / ml crystacillin (Pliva&#39;nın Hırvatistan), 37% 5 CO 2 inkübe ° C </li><li> Orijinal boya 50 mikrogram 10.76 ul ul ve DMSO (Sigma-Aldrich, Almanya) 9 (sırasıyla, Yeşil CMFDA ve Turuncu CMRA) ekleyerek iki Hücre izci 10 mM stok solüsyonları (Invitrogen, ABD) hazırlayın Invitrogen flakon. Stok çözelti 4 ° C&#39;de birkaç ay buzdolabında saklanabilir. DMSO kristallerin çözünmesi kadar, deneyler başlamadan önce ısınmak çözüm. </li><li> Bikarbonat-Krebs-HEPES tamponu (130 mM NaCl, 4.7 mM KCl, 1.2 mM MgSO 4, 1.2 mM KH 2 PO 4, 11.7 mM D-glukoz, 1.3 mM CaCl 2, 10 mM Hepes, pH 7.4) hazırlayın. Iki bikarbonat ücretsiz Krebs-HEPES tamponu 3 ml 15 ml Eppendorf tüpleri ayrı ayrı her bir stok solüsyonu 2.1 ul karışımı (10 mM CMFDA veya CMRA, sırasıyla). Bu yaklaşık çalışmada 7 mcM CMFDA (ya da CMRA) içeren bir &quot;yükleme çözüm&quot; ortaya çıkarır. </li><li> Bikarbonat ücretsiz Krebs-HEPES tamponu ile hücreler iki kez durulayın ve sonra şişeler içine çözümler yükleme eklemek. 37% 5 CO 2, 30 dakika boyunca hücrelerinin inkübe ° C. Bu ilk kuluçka reaktifleri hücre zarları aracılığıyla serbestçe geçiş sırasında, ama bir kez hücre içinde, reaktifler hücre geçirgenliği olmayan floresan reaksiyon ürünler haline dönüştürülür. </li><li> 37 ilk inkübasyondan sonra, durulama ve% 5 CO 2, iki saat boyunca başka bir kültür ortamı ile hücreleri inkübe ° C </li><li> Hem şişeler hücrelerin Trypsinize (CMFDA ve CMRA yüklü) ve 50 ml santrifüj tüpüne bir oranı 1:1 (DYP, ZDA) birlikte, kırmızı ve yeşil hücreleri karışımı. DMEM orta ile seyreltme veya santrifüj ile konsantrasyon 5 x 10 6 hücre / ml hücre konsantrasyonu ayarlayın. 24 multiwell plaka (DYP, ZDA) her kuyuda bir hücre süspansiyonu 20 ul damla yerleştirin. 37 ° C&#39;de 20 dakika için onları biraz daha iyi yüzeyine tutunur ve hücre temas kurmak için izin vermek için% 5 CO 2 hücre inkübe edin. </li></ol> II. Elektrofüzyon <ol><li> (10 mM KH2PO4, 10 mM K 2 HPO 4, 1mm MgCl 2, 75 mM sukroz) isoosomolar potasyum fosfat tamponu hazırlayın (10 mM KH2PO4, 10 mM K 2 HPO 4, 1mm MgCl 2, 250 mM sukroz) ve hypoosmolar potasyum fosfat tamponu . </li><li> Iyi altındaki hücreleri mikroskop aşamada, pozisyon üzerine elektrotlar multiwell yerleştirin ve darbe jeneratörü bağlayın. </li><li> Isoosomolar potasyum fosfat tamponu 1 ml hücreleri yıkayın. Hücre şişmesi neden için 350 ul hypoosmolar potasyum fosfat tamponu ekleyin. Tampon elektrotlar kapsamalıdır. </li><li> Hücreleri elektrik darbeleri uygulamadan önce 2 dakika hypoosmolar tampon içinde bırakın. Osmotik hücrelerinin iç ve dış arasındaki dengesizlik nedeniyle hücre içine su molekülleri bu kez akını sırasında hücre hacmi bir artışa neden olur. Hücreler maksimum hacim yakın Elektrik bakliyat düzenleyici seviyesini azaltmak başlamadan önce uygulanmalıdır. </li><li> Optimal elektrofüzyon ulaşmak ve hücre canlılığını korumak için, elektrik darbeleri optimal parametreleri kullanılmalıdır. Bunlar [1] kullanılan hücre hattı bağlıdır. Bu deneyde, 8 dikdörtgen darbeler (1 Hz 100 s süresi her) bir tren elektroporasyon cihazı (bizim durumumuzda Cliniporator, Igea, İtalya) ile, her bir örnek uygulanır. Darbeleri iyi kontrolü dışında, bir elektrik alanı, her bir kuyunun elektrot arasındaki yaklaşık 1200 V / cm, 0.8 mm çap ve aralarında 5 mm mesafe ile iki paralel Pt / Ir tel elektrotlar teslim edilir. </li><li> 10 dakika sonra nabız teslimat için rahatsız hücreleri bırakın. Floresan, faz kontrast mikroskobu ile füzyon verimi belirleyin. </li></ol> III. Görüntü edinimi ve füzyon verimi belirlenmesi <ol><li> Hücreleri bir amacı (x20) ve soğutmalı CCD kamera (VisiCam 1280, Visitron, Almanya) ile donatılmış bir floresan mikroskobu (bizim durumumuzda Zeiss AxioVert 200, Zeiss, Almanya) kullanılarak görülmektedir. Görüntüleri MetaMorph 7.1.1 (Moleküler Cihazlar, ABD) satın alınan, ancak diğer benzer satın alma yazılımı da kullanılabilir. CMFDA 548 nm&#39;de 492 nm&#39;de monokromatör (Polychrome IV, Visitron, Almanya) ve CMRA heyecanlı. CMFDA ve CMRA floresan (D605/55m C iki emisyon 535 nm &#39;de merkezlenmiş filtreler, bir (HQ535/30m CMFDA için) ve 510 nm dalga boyunda diğer merkezli kullanarak elde edilirMRA, Chroma, ABD) hem de. Dikroik ayna (Q515LP) kanal çapraz tartışma engelledi. </li><li> Her iyi beş rasgele seçilmiş alanlar için üç görüntüleri (faz kontrast, kırmızı ve yeşil floresan) edinin. Her görüntünün üçlü üç kanal görüntüleri oluşturun. Böyle bir görüntüde floresanlama sitoplazma, hücre zarları ile birlikte görülebilir. Sigortalı hücreleri böylece [Şekil 1] kolayca tespit edilebilir. </li><li> Her üç kanallı görüntü her üç tip hücre (kırmızı, yeşil ve dually floresan) güvenin. Her görüntünün tüm hücrelerin sayısı ile ikili olarak floresan hücrelerinin sayısına bölünmesiyle dually floresan hücrelerin yüzdesi belirleyin. Fusion verim yarısı erimiş hücreler tespit olmadığı için 2 ile çarpılır dually floresan hücrelerin yüzdesi olarak tanımlanır (aynı renk sigorta hücreleri). </li></ol> Temsilcisi Sonuçlar <img src="/files/ftp_upload/1991/1991fig1.jpg" alt="Şekil 1" /> Şekil 1 elektrofüzyon sonra B16F1 hücrelerinin üç kanal mikroskopi görüntü: faz kontrast, CMRA floresan (548 nm eksitasyon) ve CMFDA floresans (492 nm eksitasyon), objektif büyütme 20x

<ol>
	<li>&#268;emazar, M., Jarm, T., Miklav&#269;i&#269;, D., Ma&#269;ek-Lebar, A., Ihan, A., Kopitar, N. A., Ser&#353;a, G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Effect+of+electric-field+intensity+on+electropermeabilization+and+electrosensitivity+of+various+tumor-cell+lines+in+vitro.">Effect of electric-field intensity on electropermeabilization and electrosensitivity of various tumor-cell lines in vitro.</a> Electro. Magnetobiol. 17, 263-272 (1998).</li><li>Trontelj, K., Reber&#353;ek, M., Kandu&#353;er, M., &#269;urin &#353;erbec, V., Miklav&#269;i&#269;, D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Optimization+of+bulk+cell+electrofusion+in+vitro+for+production+of+human-mouse+heterohybridoma+cells.">Optimization of bulk cell electrofusion in vitro for production of human-mouse heterohybridoma cells.</a> Bioelectrochemistry. 74, 124-129 (2008).</li><li>Rols, M. -. P., Teissi&#233;, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Modulation+of+electrically+induced+permeabilization+and+fusion+of+Chinese+hamster+ovary+cells+by+osmotic+pressure.">Modulation of electrically induced permeabilization and fusion of Chinese hamster ovary cells by osmotic pressure.</a> Biochemistry. 29, 4561-4567 (1990).</li><li>Neil, G., Zimmermann, U. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Electrofusion.">Electrofusion.</a> Methods in Enzymology. 220, 174-196 .</li><li>Abidor, I. G., Li, L. -. H., Hui, S. W. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Studies+of+cell+pellets:+II.+Osmotic+properties,+electroporation,+and+related+phenomena:+Membrane+interactions.">Studies of cell pellets: II. Osmotic properties, electroporation, and related phenomena: Membrane interactions.</a> Biophysical journal. 67, 427-435 (1994).</li><li>Jaroszeski, M. J., Gilbert, R., Fallon, P. G., Heller, R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Mechanically+facilitated+cell-cell+electrofusion.">Mechanically facilitated cell-cell electrofusion.</a> Biophys J. 67 (4), 1574-1581 (1994).</li><li>Ramos, C., Bonefant, D., Teissi&#233;, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cell+hybridization+by+electrofusion+on+filters.">Cell hybridization by electrofusion on filters.</a> Analytical biochemistry. 302, 213-219 (2002).</li><li>Cao, Y., Yang, J., Yin, Z. Q. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Study+of+high-throughput+cell+electrofusion+in+a+microelectrode-array+chip.">Study of high-throughput cell electrofusion in a microelectrode-array chip.</a> Microfluid Nanofluid. 5, 669-675 (2008).</li><li>U&#353;aj, M., Trontelj, M., Kandu&#353;er, M., Miklav&#269;i&#269;, D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Cell+size+dynamics+and+viability+of+cells+exposed+to+hypotonic+treatment+and+electroporation+for+electrofusion+optimization.">Cell size dynamics and viability of cells exposed to hypotonic treatment and electroporation for electrofusion optimization.</a> Radiol. Oncol. 43, 108-119 (2009).</li><li>Teissi&#233;, J., Ramos, C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Correlation+between+electric+field+pulse+induced+long-lived+permeabilization+and+fusogenicity+in+cell+membranes.">Correlation between electric field pulse induced long-lived permeabilization and fusogenicity in cell membranes.</a> Biophys. J. 74, 1889-1898 (1998).</li></ol>

Non-spesifik, örneğin, dış elektrik alanları, sigorta hücre zarlarının biyoloji, biyoteknoloji, tıp ve araştırma yeteneği önemlidir. Böyle bir nonspesifik füzyon çok değerli hibrid hücreler ve monoklonal antikorlar gibi ürünler, üretim sağlar ve füzyon [2] temel mekanizmaları hakkında bilgi sağlar. Elektrofüzyon düzgün farklı hücre türlerine ayarlanmış olabilir çünkü potansiyel olarak çok etkili bir yöntemdir. Yakın fiziksel temas hücreleri kendi fusogenic haline getirilir Elektrofüzyon (füzyon eğilimli) yüksek voltajlı elektrik darbeleri ile elde edilir. Elektrofüzyon verimliliği elektrofüzyon sürecinin iki bölümden etkileyen çeşitli parametreler bağlıdır. Elektrofüzyon sürecinin ilk bölümü hücreleri arasındaki yakın fiziksel temas başarı, farklı yöntemler ile elde edilebilir [3-8]. Bağlılık yöntemi (izdiham için büyüyen hücreleri) verimli hücreleri arasındaki büyük bölgelerde kendiliğinden kurulan hücre kişilere bağlı olarak kullanılabilir, fakat birçok çekirdekleri ile çok büyük erimiş hücreler üretir. Hayatta kalmak için daha fazladır ve tomurcuklanmaya küçük hücreleri (çekirdekleri 2 ila 5), ​​(Şekil 1) elde edilir, modifiye bağlılık yöntemi kullanarak. Hücreleri arasındaki temas da deney [9] osmotik tedavisinde kullanılan nedeniyle, hücrelerin ozmotik şişme yarar. Elektrofüzyon sürecinin ikinci bölümü, hücre zarlarının fusogenic devletin başarısıdır. Fusogenic devlet membran electropermeabilized devlet (hücreler non-spesifik normalde sağlam zarından geçemez moleküllere permeabilize) ile ilişkilidir ve elektrik darbeleri aynı parametreler (genlik, uzunluk, sayı ve frekans) tarafından yönetilir [10] . Optimum elektroporasyon için gerekli elektriksel parametrelerin değerleri [1] ve elektrofüzyon farklı hücreler arasında farklılık hücrelerin boyutu ve biyolojik özellikleri bağlıdır. Elektrik parametreleri böylece, füzyon elde etmek için, füzyon ortağı olarak kullanılan farklı hücre hatları, için optimize edilmesi gerekir.

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		<div>
		<table border="1">
		<thead>
		<tr>
		<th>Material Name</th>
		<th>Type</th>
		<th>Company</th>
		<th>Catalogue Number</th>
		<th>Comment</th>
		</tr>
		</thead>
		<tbody>
		
<tr>
<td>CMRA</td>
<td>Reagent</td>
<td>Invitrogen</td>
<td>C34551</td>
<td>Cytosolic fluorescent dye</td>
</tr>
<tr>
<td>CMFDA</td>
<td>Reagent</td>
<td>Invitrogen</td>
<td>C7025</td>
<td>Cytosolic fluorescent dye</td>
</tr>
<tr>
<td>DMSO</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>D2650</td>
<td>&nbsp;</td>
<tr>
<td>DMEM </td>
<td>Reagent</td>
<td>Sigma-Aldrich </td>
<td>D5671</td>
<td>Dulbecco's modified Eagle's medium</td>
</tr>
<tr>
<td>Fetal calf serum</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>F4135</td>
<td>&nbsp;</td>
<tr>
<td>L-glutamine</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>G7513</td>
<td>&nbsp;</td>
<tr>
<td>crystacillin</td>
<td>Reagent</td>
<td>Pliva</td>
<td>625110</td>
<td>antibiotic</td>
</tr>
<tr>
<td>gentamicin</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>G1397</td>
<td>antibiotic</td>
</tr>
<tr>
<td>Hepes</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>H0887</td>
<td>&nbsp;</td>
<tr>
<td>KH2PO4</td>
<td>Reagent</td>
<td>Merck </td>
<td>A124873 927</td>
<td>&nbsp;</td>
<tr>
<td>KH2PO4</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>4248</td>
<td>&nbsp;</td>
<tr>
<td>MgCl2</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>M-8266</td>
<td>&nbsp;</td>
<tr>
<td>NaCl</td>
<td>Reagent</td>
<td>Fluka</td>
<td>71382</td>
<td>&nbsp;</td>
<tr>
<td>KCl</td>
<td>Reagent</td>
<td>Merck</td>
<td>A154336 908</td>
<td>&nbsp;</td>
<tr>
<td>MgSO4</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>M2643</td>
<td>&nbsp;</td>
<tr>
<td>D-glucose</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>G8270</td>
<td>&nbsp;</td>
<tr>
<td>CaCl2</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>C4901</td>
<td>&nbsp;</td>
<tr>
<td>sucrose</td>
<td>Reagent</td>
<td>Sigma-Aldrich</td>
<td>16104</td>
<td>&nbsp;</td>
<tr>
<td>Electric pulse generator</td>
<td>Tool</td>
<td>Igea</td>
<td>&nbsp;</td>
<td>Cliniporator VITAE</td>
</tr>
<tr>
<td>Multiwell plate</td>
<td>Tool</td>
<td>TPP</td>
<td>92424</td>
<td>&nbsp;</td>
<tr>
<td>50 ml centrifuge tube</td>
<td>Tool</td>
<td>TPP</td>
<td>91050</td>
<td>&nbsp;</td>
<tr>
<td>15 ml centrifuge tube</td>
<td>Tool</td>
<td>TPP</td>
<td>91015</td>
<td>&nbsp;</td>
<tr>
<td>25 cm2 culture flask</td>
<td>Tool</td>
<td>TPP</td>
<td>90026</td>
<td>&nbsp;</td>
<tr>
<td>Electrodes</td>
<td>Tool</td>
<td>Custom made</td>
<td>&nbsp;</td>
<td>Pt/Ir</td>
</tr>		</tbody>
		</table>
		</div>

cell electrofusion visualized with fluorescence microscopy

Hücre elektrofüzyon hibrit hücrelerinin, insan tedavisi için hazırlamak için kullanılan güvenli bir non-viral ve kimyasal olmayan bir yöntemdir. Elektrofüzyon yakın temas içinde olan hücrelere kısa yüksek voltajlı elektrik darbeleri uygulama içerir. Kısa, yüksek voltajlı elektrik darbeleri Uygulama hücre plazma membranlar istikrarsızlaştırma neden olur. Istikrarsızlaştırdı membranlar farklı moleküller için daha geçirgen ve aynı zamanda herhangi bir komşu istikrarsızlaştırdı membranlar ile füzyonu eğilimli. Elektrofüzyon böylece çok farklı hücreler non-spesifik bir füzyon sağlamak için uygun bir yöntemdir<em&gt; In vitro</em&gt;. Elektrik alanı istikrarsızlaştırdı füzyon, hücre zarları, elde etmek için, kendi çift katlı lipit katmanını birleştirme ve dolayısıyla sitoplazma izin yakın bir temas halinde olmalıdır. Bu video, hücre verimli elektrofüzyon göstermektedir<em&gt; In vitro</em&gt; Modifiye bağlılık yöntemi sayesinde. Bu yöntemde, hücreler, sadece biraz daha iyi yüzey takmak için izin verilir, bu orta takas ve hücreleri hala küresel şekli korumak olabilir. Fusion görselleştirme, farklı floresan hücre izci boyalarla hücrelerinin sitoplazmasında öncesi etiketleme tarafından değerlendirilir; hücrelerin yarısı, turuncu CMRA ve yeşil CMFDA ile diğer yarısı ile etiketlenir. Fusion verimi sayısı iki ile çarpılır tüm hücreleri ile bölünmüş dually floresan hücrelerinin sayısı olarak belirlenir.

Watch this Scientific Journal Video about Cell Electrofusion Visualized with Fluorescence Microscopy at JoVE.com

Cell Electrofusion Visualized with Fluorescence Microscopy

Bu video hücrelerin verimli elektrofüzyon göstermektedir<em&gt; In vitro</em&gt; Elektroporasyon ve floresan mikroskobu ile erimiş hücreler görselleştirme sonraki algılama kullanarak modifiye bağlılık yöntem sayesinde.

Hücre Elektrofüzyon Floresan Mikroskop ile görüntülendi

Cell electrofusion is a safe, non-viral and non-chemical method that can be used for preparing hybrid cells for human therapy. Electrofusion involves ...

cell-electrofusion-visualized-with-fluorescence-microscopy

Research

JoVE Journal

Biology

14.1K Görüntüleme.  University of Ljubljana. Bu video hücrelerin verimli elektrofüzyon göstermektedir In vitro Elektroporasyon ve floresan mikroskobu ile erimiş hücreler görselleştirme sonraki algılama kullanarak modifiye bağlılık yöntem sayesinde.

Video: Cell Electrofusion Visualized with Fluorescence Microscopy

Visualizing Single-molecule DNA Replication with Fluorescence Microscopy

We describe a simple fluorescence microscopy-based real-time method for observing DNA replication at the single-molecule level. A circular, forked DNA template is attached to a functionalized glass coverslip and replicated extensively after introduction of replication proteins and nucleotides (Figure 1). The growing product double-strand DNA (dsDNA) is extended with laminar flow and visualized by using an intercalating dye. Measuring the position of the growing DNA end in real time allows precise determination of replication rate (Figure 2). Furthermore, the length of completed DNA products reports on the processivity of replication. This experiment can be performed very easily and rapidly and requires only a fluorescence microscope with a reasonably sensitive camera.


This protocol demonstrates a simple single-molecule fluorescence microscopy technique for visualizing DNA replication by individual replisomes in real time.

Floresan Mikroskop ile görselleştirme Tek molekül DNA replikasyonu

We describe a simple fluorescence microscopy-based real-time method for observing DNA replication at the single-molecule level. A circular, forked DNA ...

Biyoloji

Dopamine Release at Individual Presynaptic Terminals Visualized with FFNs

The nervous system transmits signals between neurons via neurotransmitter release during synaptic vesicle fusion. To observe neurotransmitter uptake and release from individual presynaptic terminals directly, we designed fluorescent false neurotransmitters as substrates for the synaptic vesicle monoamine transporter. Using these probes to image dopamine release in the striatum, we made several observations pertinent to synaptic plasticity. We found that the fraction of synaptic vesicles releasing neurotransmitter per stimulus was dependent on the stimulus frequency. A kinetically distinct "reserve" synaptic vesicle population was not observed under these experimental conditions. A frequency-dependent heterogeneity of presynaptic terminals was revealed that was dependent in part on D2 dopamine receptors, indicating a mechanism for frequency-dependent coding of presynaptic selection.

Hui Zhang and Niko G. Gubernator contributed equally to this work.

A new means to measure neurotransmission optically using fluorescent dopamine analogs.

Bireysel Presinaptik Terminalleri Dopamin Yayın FFNs ile görüntülendi

The nervous system transmits signals between neurons via neurotransmitter release during synaptic vesicle fusion. To observe neurotransmitter uptake and ...

Time-lapse Imaging of Mitosis After siRNA Transfection

Changes in cellular organization and chromosome dynamics that occur during mitosis are tightly coordinated to ensure accurate inheritance of genomic and cellular content. Hallmark events of mitosis, such as chromosome movement, can be readily tracked on an individual cell basis using time-lapse fluorescence microscopy of mammalian cell lines expressing specific GFP-tagged proteins. In combination with RNAi-based depletion, this can be a powerful method for pinpointing the stage(s) of mitosis where defects occur after levels of a particular protein have been lowered. In this protocol, we present a basic method for assessing the effect of depleting a potential mitotic regulatory protein on the timing of mitosis. Cells are transfected with siRNA, placed in a stage-top incubation chamber, and imaged using an automated fluorescence microscope. We describe how to use software to set up a time-lapse experiment, how to process the image sequences to make either still-image montages or movies, and how to quantify and analyze the timing of mitotic stages using a cell-line expressing mCherry-tagged histone H2B. Finally, we discuss important considerations for designing a time-lapse experiment. This strategy is complementary to other approaches and offers the advantages of 1) sensitivity to changes in kinetics that might not be observed when looking at cells as a population and 2) analysis of mitosis without the need to synchronize the cell cycle using drug treatments. The visual information from such imaging experiments not only allows the sub-stages of mitosis to be assessed, but can also provide unexpected insight that would not be apparent from cell cycle analysis by FACS.

Here we describe a basic protocol to image and quantify the mitotic timing of live mammalian tissue culture cells after siRNA transfection.

Zaman atlamalı Görüntüleme siRNA Transfeksiyon sonra Mitoz

Changes in cellular organization and chromosome dynamics that occur during mitosis are tightly coordinated to ensure accurate inheritance of genomic and ...

Quantitative Live Cell Fluorescence-microscopy Analysis of Fission Yeast

Several microscopy techniques are available today that can detect a specific protein within the cell. During the last decade live cell imaging using fluorochromes like Green Fluorescent Protein (GFP) directly attached to the protein of interest has become increasingly popular 1. Using GFP and similar fluorochromes the subcellular localisations and movements of proteins can be detected in a fluorescent microscope. Moreover, also the subnuclear localisation of a certain region of a chromosome can be studied using this technique. GFP is fused to the Lac Repressor protein (LacR) and ectopically expressed in the cell where tandem repeats of the lacO sequence has been inserted into the region of interest on the chromosome2. The LacR-GFP will bind to the lacO repeats and that area of the genome will be visible as a green dot in the fluorescence microscope. Yeast is especially suited for this type of manipulation since homologous recombination is very efficient and thereby enables targeted integration of the lacO repeats and engineered fusion proteins with GFP 3. Here we describe a quantitative method for live cell analysis of fission yeast. Additional protocols for live cell analysis of fission yeast can be found, for example on how to make a movie of the meiotic chromosomal behaviour 4. In this particular experiment we focus on subnuclear organisation and how it is affected during gene induction. We have labelled a gene cluster, named Chr1, by the introduction of lacO binding sites in the vicinity of the genes. The gene cluster is enriched for genes that are induced early during nitrogen starvation of fission yeast 5. In the strain the nuclear membrane (NM) is labelled by the attachment of mCherry to the NM protein Cut11 giving rise to a red fluorescent signal. The Spindle Pole body (SPB) compound Sid4 is fused to Red Fluorescent Protein (Sid4-mRFP) 6. In vegetatively growing yeast cells the centromeres are always attached to the SPB that is embedded in the NM 7. The SPB is identified as a large round structure in the NM. By imaging before and 20 minutes after depletion of the nitrogen source we can determine the distance between the gene cluster (GFP) and the NM/SPB. The mean or median distances before and after nitrogen depletion are compared and we can thus quantify whether or not there is a shift in subcellular localisation of the gene cluster after nitrogen depletion.

The fission yeast, Schizosaccharomyces pombe, is a good model system to study basic cellular processes. Here we describe a method to perform quantitative live cell analysis of fission yeast. In this particular experiment we focus on organisation of the genome within the cell nucleus, but the method can also be used to study cytosolic factors.

Fisyon Maya Kantitatif Canlı Hücre Floresan mikroskopi Analizi

Several microscopy techniques are available today that can detect a specific protein within the cell. During the last decade live cell imaging using ...

Simultaneous Multicolor Imaging of Biological Structures with Fluorescence Photoactivation Localization Microscopy

Localization-based super resolution microscopy can be applied to obtain a spatial map (image) of the distribution of individual fluorescently labeled single molecules within a sample with a spatial resolution of tens of nanometers. Using either photoactivatable (PAFP) or&#160;photoswitchable (PSFP) fluorescent proteins fused to proteins of interest, or organic dyes conjugated to antibodies or other molecules of interest, fluorescence photoactivation localization microscopy (FPALM) can simultaneously image multiple species of molecules within single cells. By using the following approach, populations of large numbers (thousands to hundreds of thousands) of individual molecules are imaged in single cells and localized with a precision of ~10-30 nm. Data obtained can be applied to understanding the nanoscale spatial distributions of multiple protein types within a cell. One primary advantage of this technique is the dramatic increase in spatial resolution: while diffraction limits resolution to ~200-250 nm in conventional light microscopy, FPALM can image length scales more than an order of magnitude smaller. As many biological hypotheses concern the spatial relationships among different biomolecules, the improved resolution of FPALM can provide insight into questions of cellular organization which have previously been inaccessible to conventional fluorescence microscopy. In addition to detailing the methods for sample preparation and data acquisition, we here describe the optical setup for FPALM. One additional consideration for researchers wishing to do super-resolution microscopy is cost: in-house setups are significantly cheaper than most commercially available imaging machines. Limitations of this technique include the need for optimizing the labeling of molecules of interest within cell samples, and the need for post-processing software to visualize results. We here describe the use of PAFP and PSFP expression to image two protein species in fixed cells. Extension of the technique to living cells is also described.

We demonstrate the use of fluorescence photo activation localization microscopy (FPALM) to simultaneously image multiple types of fluorescently labeled molecules&#160;within cells. The techniques described yield the localization of thousands to hundreds of thousands of individual fluorescent labeled proteins, with a precision of tens of nanometers&#160;within single cells.

Localization-based super resolution microscopy can be applied to obtain a spatial map (image) of the distribution of individual fluorescently labeled ...

Protein-protein Interactions Visualized by Bimolecular Fluorescence Complementation in Tobacco Protoplasts and Leaves

Many proteins interact transiently with other proteins or are integrated into multi-protein complexes to perform their biological function. Bimolecular fluorescence complementation (BiFC) is an in vivo method to monitor such interactions in plant cells. In the presented protocol the investigated candidate proteins are fused to complementary halves of fluorescent proteins and the respective constructs are introduced into plant cells via agrobacterium-mediated transformation. Subsequently, the proteins are transiently expressed in tobacco leaves and the restored fluorescent signals can be detected with a confocal laser scanning microscope in the intact cells. This allows not only visualization of the interaction itself, but also the subcellular localization of the protein complexes can be determined. For this purpose, marker genes containing a fluorescent tag can be coexpressed along with the BiFC constructs, thus visualizing cellular structures such as the endoplasmic reticulum, mitochondria, the Golgi apparatus or the plasma membrane. The fluorescent signal can be monitored either directly in epidermal leaf cells or in single protoplasts, which can be easily isolated from the transformed tobacco leaves. BiFC is ideally suited to study protein-protein interactions in their natural surroundings within the living cell. However, it has to be considered that the expression has to be driven by strong promoters and that the interaction partners are modified due to fusion of the relatively large fluorescence tags, which might interfere with the interaction mechanism. Nevertheless, BiFC is an excellent complementary approach to other commonly applied methods investigating protein-protein interactions, such as coimmunoprecipitation, in vitro pull-down assays or yeast-two-hybrid experiments.

Formation of protein complexes in vivo can be visualized by bimolecular fluorescence complementation. Interaction partners are fused to complementary parts of fluorescent tags and transiently expressed in tobacco leaves, resulting in a reconstituted fluorescent signal upon close proximity of the two proteins.

Tütün protoplastlarında ve Yapraklar Bimoleküler Floresan tamamlama tarafından Visualized protein-protein etkileşimleri

Many proteins interact transiently with other proteins or are integrated into multi-protein complexes to perform their biological function. Bimolecular ...

Sample Preparation for Single Virion Atomic Force Microscopy and Super-resolution Fluorescence Imaging

Immobilization of virions to glass surfaces is a critical step in single virion imaging. Here we present a technique&#160;adopted from single molecule imaging assays which allows adhesion of single virions to glass surfaces with specificity. This preparation is based on grafting the surface of the glass with a mixture of PLL-g-PEG and PLL-g-PEG-Biotin, adding a layer of avidin, and finally creating virion anchors through attachment of biotinylated virus specific antibodies. We have applied this technique across a range of experiments including atomic force microscopy (AFM) and super-resolution fluorescence imaging. This sample preparation method results in a control adhesion of the virions to the surface.

The attachment of virions to a surface is a requirement for single virion imaging by Super-resolution fluorescence imaging or atomic force microscopy (AFM). Here we demonstrate a sample preparation method for controlled adhesion of virions to glass surfaces suitable for use in AFM and super-resolution fluorescence imaging.

Tek Virion Atomik Kuvvet Mikroskopisi ve Süper Çözünürlüklü Floresan Görüntüleme için Numune Hazırlama

Immobilization of virions to glass surfaces is a critical step in single virion imaging. Here we present a technique&#160;adopted from single molecule ...

Visualizing Stromule Frequency with Fluorescence Microscopy

Stromules, or "stroma-filled tubules", are narrow, tubular extensions from the surface of the chloroplast that are universally observed in plant cells but whose functions remain mysterious. Alongside growing attention on the role of chloroplasts in coordinating plant responses to stress, interest in stromules and their relationship to chloroplast signaling dynamics has increased in recent years, aided by advances in fluorescence microscopy and protein fluorophores that allow for rapid, accurate visualization of stromule dynamics. Here, we provide detailed protocols to assay stromule frequency in the epidermal chloroplasts of Nicotiana benthamiana, an excellent model system for investigating chloroplast stromule biology. We also provide methods for visualizing chloroplast stromules in vitro by extracting chloroplasts from leaves. Finally, we outline sampling strategies and statistical approaches to analyze differences in stromule frequencies in response to stimuli, such as environmental stress, chemical treatments, or gene silencing. Researchers can use these protocols as a starting point to develop new methods for innovative experiments to explore how and why chloroplasts make stromules.

Protocols to investigate the dynamics of chloroplast stromules, the stroma-filled tubules that extend from the surface of chloroplasts, are described.

Floresan Mikroskopi ile Stromule Frekansı görselleştirme

Stromules, or "stroma-filled tubules", are narrow, tubular extensions from the surface of the chloroplast that are universally observed in plant cells but ...

Light Sheet Fluorescence Microscopy of Plant Roots Growing on the Surface of a Gel

One of the key questions in understanding plant development is how single cells behave in a larger context of the tissue. Therefore, it requires the observation of the whole organ with a high spatial- as well as temporal resolution over prolonged periods of time, which may cause photo-toxic effects. This protocol shows a plant sample preparation method for light-sheet microscopy, which is characterized by mounting the plant vertically on the surface of a gel. The plant is mounted in such a way that the roots are submerged in a liquid medium while the leaves remain in the air. In order to ensure photosynthetic activity of the plant, a custom-made lighting system illuminates the leaves. To keep the roots in darkness the water surface is covered with sheets of black plastic foil. This method allows long-term imaging of plant organ development in standardized conditions.

This protocol shows a plant sample preparation method for light-sheet microscopy. The setup is characterized by mounting the plant vertically on the surface of a gel and letting it grow in controlled bright conditions. This allows long-term observation of plant organ development in standardized conditions.

Bir Gel Yüzeyinde Büyüyen Bitki kökleri Işık Sac Flüoresan Mikroskopi

One of the key questions in understanding plant development is how single cells behave in a larger context of the tissue. Therefore, it requires the ...

Open-source Single-particle Analysis for Super-resolution Microscopy with VirusMapper

Super-resolution fluorescence microscopy is currently revolutionizing cell biology research. Its capacity to break the resolution limit of around 300 nm allows for the routine imaging of nanoscale biological complexes and processes. This increase in resolution also means that methods popular in electron microscopy, such as single-particle analysis, can readily be applied to super-resolution fluorescence microscopy. By combining this analytical approach with super-resolution optical imaging, it becomes possible to take advantage of the molecule-specific labeling capacity of fluorescence microscopy to generate structural maps of molecular elements within a metastable structure. To this end, we have developed a novel algorithm &#8212; VirusMapper &#8212; packaged as an easy-to-use, high-performance, and high-throughput ImageJ plugin. This article presents an in-depth guide to this software, showcasing its ability to uncover novel structural features in biological molecular complexes. Here, we present how to assemble compatible data and provide a step-by-step protocol on how to use this algorithm to apply single-particle analysis to super-resolution images.

This manuscript uses the Fiji-based open-source software package VirusMapper to apply single-particle analysis to super-resolution microscopy images in order to generate precise models of nanoscale structure.

VirusMapper Süper çözünürlüklü Mikroskopi Açık kaynak Tek parçacık Analizi

Super-resolution fluorescence microscopy is currently revolutionizing cell biology research. Its capacity to break the resolution limit of around 300 nm ...